ASAP : Automated Single-cell Analysis Pipeline

Genetic-programming framework for various genetic programming paradigms such as linear genetic programming, tree genetic programming, gene expression programming, etc

Encoding ME models in SBML

Software for intuitively doing Differential Gene Expression (DGE) analysis on Windows and GNU\Linux, based on R packages.

Signaling and Dynamic Regulatory Events Miner

Source code of the Java Bgee applications

A Stochastic Model of Gene Expression Including Splicing Events