NASQAR: A web-based platform for High-throughput sequencing data analysis and visualization

single cell and bulk RNASeq analysis scripts

Developmental timeseries of the reef-building coral Montipora capitata under predicted low and extreme low ocean acidification scenarios

Pipeline of somatic variant analysis using Waldenstrom macroglobulinemia patient’s RNA-seq data, including tools like STAR, HTseq, VarScan in parallel computing in SGE clusters, Deseq2 and GSEA in R

A shiny app to perform single and multifactor differential analysis using DESeq2, edgeR, and limma

Package for the recount workshop for BioC2017

Differential Gene Expression analysis in R using DESeq2

Tuberculosis and the microbiome

https://foreverstas.github.io/DGE_workshop_rus/

RNA-Seq Data Analysis in R: From Raw Counts to Differential Expression Analysis

Transcriptional differences between Miscanthus hybrids with contrasting starch and sucrose concentrations and biomass production