Jupyter Dock is a set of Jupyter Notebooks for performing molecular docking protocols interactively, as well as visualizing, converting file formats and analyzing the results.

A Julia package to view macromolecular structures in the REPL, in a Jupyter notebook/JupyterLab or in Pluto

BioJava examples in Jupyter Notebooks

Python snippets for PyMOL to be run in Jupyterlab via the jupyterlab-snippets-multimenus extension.

Library of PyMOL Python snippets for Google Colab.

Jupyter notebook examples of SCOP3P REST API services

Daniel & Gabby's Notebook

Daniel & Gabby's Notebook

Jupyter notebook examples of Scop3P REST API services

A collection of helpful Python3 Jupyter notebooks for working with the AF3 server. My first repository so please be nice :)

This notebook does the analysis of a protein sequence dataset in FASTA format. It addresses challenges in data import, alignment, embedding, and classification using bioinformatics tools and machine learning techniques. The solution provides a systematic approach to extract insights from structured data, crucial for bioinformatics research.