Abstract
Voxel-wise comparisons have been largely used in the analysis of populations to identify biomarkers for pathologies, disease progression, or to predict a treatment outcome. On the basis of a good interindividual spatial alignment, 3D maps are produced, allowing to localise regions where significant differences between groups exist. However, these techniques have received some criticism as they rely on conditions wich are not always met. Firstly, the results may be affected by misregistrations; secondly, the statistics behind the models assumes normally distributed data; finally, because of the size of the images, some strategies must be used to control for the rate of false detection. In this paper, we propose a spatial (3D) nonparametric mixed-effects model for population analysis. It overcomes some of the issues of classical voxel-based approaches, namely robustness to false positive rates, misregistrations and large variances between groups. Examples on numerical phantoms and real clinical data illustrate the feasiblity of the approach. An example of application within the development of voxel-wise predictive models of rectal toxicity in prostate cancer radiotherapy is presented. Results demonstrate an improved sensitivity and reliability for group analysis compared with standard voxel-wise methods and open the way for potential applications in computational anatomy.
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References
Friston, K.J., Holmes, A.P., et al.: Fr: Statistical Parametric Maps in Functional Imaging: A General LInear Approach. Human Brain Mapping, 189–210 (1995)
Ashburner, J., Friston, K.: Voxel-based morphometry–the methods. Neuroimag. 11(6 Pt 1), 805–821 (2000)
Yuan, Q., Zou, L., Chen, Q.: Voxel-based morphometric study of brain structure in alzheimer’s disease. Sichuan Da Xue Xue Bao Yi Xue Ban 39(3), 496–499 (2008)
Hua, X., Leow, A.D., et al.: Tensor-based morphometry as a neuroimaging biomarker for alzheimer’s disease: an mri study of 676 ad, mci, and normal subjects. Neuroimage 43(3), 458–469 (2008)
Leow, A., Yanovsky, I., et al.: Statistical properties of jacobian maps and the realization of unbiased large-deformation nonlinear image registration. IEEE Transactions on Medical Imaging 26(6), 822–832 (2007)
Chételat, G., Desgranges, et al.: Direct voxel-based comparison between grey matter hypometabolism and atrophy in alzheimer’s disease. Brain 131(Pt 1), 60–71 (2008)
Desgranges, B., Matuszewski, et al.: Anatomical and functional alterations in semantic dementia: a voxel-based mri and pet study. Neurobiol. Aging 28(12), 1904–1913 (2007)
Friston, K.J., Holmes, A.P., et al.: Analysis of fMRI Time-Series Revisited. NeuroImage 2, 45–53 (1995)
Kupchak, C., Battista, J., Dyk, J.V.: Experience-driven dose-volume histogram maps of NTCP risk as an aid for radiation treatment plan selection and optimization. Med. Phys. 35(1), 333–343 (2008)
Heemsbergen, W.D., Al-Mamgani, et al.: Urinary obstruction in prostate cancer patients from the dutch trial (68 gy vs. 78 gy): Relationships with local dose, acute effects, and baseline characteristics. Int. J. Radiat. Oncol. Biol. Phys. (January 2010)
Witte, M.G., Heemsbergen, W.D., et al.: Relating dose outside the prostate with freedom from failure in the dutch trial 68 gy vs. 78 gy. Int. J. Radiat. Oncol. Biol. Phys. 77(1), 131–138 (2010)
Bookstein, F.: ”Voxel-based morphometry” should not be used with imperfectly registered images. Neuroimage 14(6), 1454–1462 (2001)
Ashburner, J., Friston, K.: Why voxel-based morphometry should be used. NeuroImage 14, 1238–1243 (2001); PMID: 11707080
Genovese, C.R., Lazar, N.A., Nichols, T.: Thresholding of statistical maps in functional neuroimaging using the false discovery rate. Neuroimage 15(4), 870–878 (2002)
Nichols, T.E., Holmes, A.P.: Nonparametric permutation tests for functional neuroimaging: a primer with examples. Hum. Brain Mapp. 15(1), 1–25 (2002)
Worsley, K., Evans, A., et al.: A three dimensional statistical analysis for cbf activation studies in human brain. J. Cereb. Blood Flow Metab. 12, 900–918 (1992)
Hoover, D.R., Rice, J., et al.: Nonparametnc smoothing estimates of time-varying coefficient models with longitudinal data. Biometrika 85, 809–822 (1998)
Wu, H., Zhan, J.T.: Nonparametric Regression Methods for Longitudinal Data Analysis. John Wiley & Sons, Inc., New Jersey (2006)
Chen, Y., Guo, W.: A local nonparametric model for simultaneous image segementation and adaptive smooth. computational and applied mathematics technical report 07-34, UCLA (2007)
Roche, A., Mériaux, S., Keller, M., Thirion, B.: Mixed-effects statistics for group analysis in fMRI: A nonparametric maximum likelihood approach. Neuroimage 38, 501–510 (2007)
Tibshirani, R., Hastie, T.: Local likelihood estimation. Journal of American Statistical Association 82, 559–567 (1987)
R Development Core Team: R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria (2010) ISBN 3-900051-07-0
Pinheiro, J., Bates, D., DebRoy, S., Sarkar, D.: R Development Core Team: nlme: Linear and Nonlinear Mixed Effects Models (2010); R Package Version 3.1-97
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Ospina, J.D. et al. (2011). Spatial Nonparametric Mixed-Effects Model with Spatial-Varying Coefficients for Analysis of Populations. In: Suzuki, K., Wang, F., Shen, D., Yan, P. (eds) Machine Learning in Medical Imaging. MLMI 2011. Lecture Notes in Computer Science, vol 7009. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-24319-6_18
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DOI: https://doi.org/10.1007/978-3-642-24319-6_18
Publisher Name: Springer, Berlin, Heidelberg
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