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Pull requests: common-workflow-language/cwltool

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Pull requests list

Reduce bind mounting (and thus --bind args) in containers.
#1568 opened Nov 17, 2021 by DailyDreaming Loading…
3
Detect pathmapper name conflicts.
#805 opened Jul 1, 2018 by tetron • Draft
3
WIP Add metadata propagation
#876 opened Aug 20, 2018 by bogdang989 Loading…
2
Ensure that parent dir of host_outdir_tgt exists before copying.
#902 opened Sep 12, 2018 by johanneskoester Loading…
17
Don't fail checksum calculation for missing File
#967 opened Nov 9, 2018 by mr-c • Draft
Versioning with latest python libs
#1015 opened Dec 14, 2018 by pjotrp Loading…
8
Avoid relink if not having permissions
#1045 opened Jan 24, 2019 by bogdang989 Loading…
1
4
Experimental feature to change substitution prefix.
#1132 opened Jun 10, 2019 by tetron • Draft
2
overwrite manually set ids
#1210 opened Oct 15, 2019 by mr-c • Draft
6
Output destination
#1219 opened Nov 22, 2019 by tetron • Draft
4
ArraySchema.items does need typeDSL after all
#1515 opened Sep 9, 2021 by mr-c • Draft
1 task
2
handle unsupported file operations
#1544 opened Oct 14, 2021 by pymonger Loading…
1
3
use tmpdir/tmp_outdir prefix settings on --no-container execution
#418 opened Jun 9, 2017 by inutano Loading…
4
WIP fix #1330
#1566 opened Nov 11, 2021 by manabuishii • Draft
5 tasks
32
Fix spurious validation error with scatter+conditionals
#1640 opened Mar 7, 2022 by tetron Loading…
5
draft schema for input paramater restrictions extension
#1665 opened May 6, 2022 by mr-c • Draft
2 tasks
12
fix empty scatter bug
#1669 opened May 20, 2022 by mr-c • Draft
1 task done
1
1
Propagate input annotations to primary.cwlprov files
#1678 opened Jun 7, 2022 by RenskeW • Draft
3 of 8 tasks
27
Message about other implementations
#1683 opened Jun 22, 2022 by tetron • Draft
2
Evaluate requirements and hints using the correct input reference
#1703 opened Aug 6, 2022 by kinow • Draft
1
17
Fixed another symlinking issue with Docker + staged files from InitialWorkDirRequirement
#1708 opened Aug 16, 2022 by jfennick Loading…
11
Implementation of store RDF export of the workflow in CWL Prov RO-Bundle
#1709 opened Aug 16, 2022 by jjkoehorst • Draft
18
drop pack.py in favor of cwl_utils.pack
#1730 opened Sep 2, 2022 by mr-c • Draft
1 task
4
Allow overrides using reqs from CWL v1.1+
#1755 opened Oct 24, 2022 by mr-c Loading…
4 tasks
1
1
Bump cibuildwheel from 2.22.0 to 2.23.2 dependencies Pull requests that update a dependency file python Pull requests that update Python code
#2111 opened Mar 25, 2025 by dependabot bot Loading…
2
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