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## ChangeLog v0.8.2 (2022....)
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- + Purged lz4 sources if favour of using the lz4 dependency (the Debian
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- library appears to be complete
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+ + Slightly faster static sambamba with ldc2 1.27+LLVM 11.
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+ + Purged lz4 sources in favour of using the lz4 dependency (the Debian
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+ library appears to be complete)
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+ Fixed meson builds for Debian, see https://github.com/biod/sambamba/issues/484
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(thanks @atille )
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+ Removed most ldc2 deprecation warnings
Original file line number Diff line number Diff line change @@ -10,28 +10,27 @@ wget ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/phase3/data/HG00100/alignment/HG00
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Processing an 841Mb BAM file.
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- *** Penguin2
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+ *** Penguin2 56x Intel(R) Xeon(R) CPU E5-2683 v3 @ 2.00GHz, 256Gb
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+ Sambamba appears to be slightly faster between 0.8.1 and 0.8.2 thanks to ldc2 and LLVM updates.
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#+begin_src sh
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time ./sambamba-0.8.2 sort HG00100.chrom20.ILLUMINA.bwa.GBR.low_coverage.20130415.bam >
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/dev/null
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- sambamba 0.8.2
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- by Artem Tarasov and Pjotr Prins (C) 2012-2021
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+ sambamba 0.8.2 by Artem Tarasov and Pjotr Prins (C) 2012-2021
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LDC 1.27.1 / DMD v2.097.2 / LLVM11.0.0 / bootstrap LDC - the LLVM D compiler (1.27.1)
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+ real 0m18.636s
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+ user 3m47.704s
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+ sys 0m18.764s
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- real 0m18.863s
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- user 4m5.428s
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- sys 0m20.552s
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-
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- sambamba 0.8.1
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- by Artem Tarasov and Pjotr Prins (C) 2012-2021
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+ sambamba 0.8.1 by Artem Tarasov and Pjotr Prins (C) 2012-2021
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LDC 1.26.0 / DMD v2.096.1 / LLVM9.0.1 / bootstrap LDC - the LLVM D compiler (0.17.6)
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- real 0m20.158s
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- user 4m5.968s
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- sys 0m20.212s
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+ real 0m19.045s
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+ user 3m50.088s
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+ sys 0m16.908s
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#+end_src
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*** AMD Ryzen 7 3700X 8-Core Processor
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