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DESCRIPTION
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Package: FlowSorted.Blood.WGBS.BLUEPRINT
Title: Whole genome bisulfite-sequencing data on sorted
blood cell populations from BLUEPRINT
Version: 0.99.4
Authors@R: c(
person("Stephanie", "Hicks", role = c("aut", "cre"),
email = "shicks19@jhu.edu",
comment = c(ORCID = "0000-0002-7858-0231")))
Description: This package measures the DNA methylation of
sorted cell types from whole blood (venous and cord)
from the BLUEPRINT consortia using the whole genome
bisulfite-sequencing platform (WGBS). BigWig files
were downloaded and converted to HDF5 files. A
BSseq object from the bsseq package is returned.
Data are available on ExperimentHub as HDF5 files
as a data package.
License: CC BY 4.0
Depends: S4Vectors, HDF5Array, SummarizedExperiment, bsseq
Imports: ExperimentHub
Suggests: knitr, BiocStyle
VignetteBuilder: knitr
biocViews: SequencingData, MethylSeqData, ExperimentHub
NeedsCompilation: no
Encoding: UTF-8
BugReports: https://github.com/stephaniehicks/FlowSorted.Blood.WGBS.BLUEPRINT/
URL: https://github.com/stephaniehicks/FlowSorted.Blood.WGBS.BLUEPRINT/